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UniProtKB/Swiss-Prot entry Q7XR80


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name ARP8_ORYSJ
Primary accession number Q7XR80
Secondary accession numbers A3AYE8 A8WAZ7 Q01ML6 Q0J983 Q259W4
Integrated into Swiss-Prot on February 26, 2008
Sequence was last modified on October 1, 2003 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 33)
Name and origin of the protein
Protein name Actin-related protein 8
Synonym F-box protein ARP8
Gene name
Name: ARP8
OrderedLocusNames: Os04g0667700, LOC_Os04g57210
ORFNames: B0811B10.7, H1005F08.28, OsJ_015820, OSJNBa0043A12.5
From
Oryza sativa subsp. japonica (Rice) [TaxID: 39947] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Protein existence 2: Evidence at transcript level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1534/genetics.107.079616; PubMed=17947413 [NCBI, ExPASy, EBI, Israel, Japan]
Mather K.A., Caicedo A.L., Polato N.R., Olsen K.M., McCouch S., Purugganan M.D.;
"The extent of linkage disequilibrium in rice (Oryza sativa L.).";
Genetics 177:2223-2232(2007).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature01183; PubMed=12447439 [NCBI, ExPASy, EBI, Israel, Japan]
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.;
"Sequence and analysis of rice chromosome 4.";
Nature 420:316-320(2002).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1038/nature03895; PubMed=16100779 [NCBI, ExPASy, EBI, Israel, Japan]
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[4]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
DOI=10.1101/gr.5509507; PubMed=17210932 [NCBI, ExPASy, EBI, Israel, Japan]
The rice annotation project (RAP);
"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.";
Genome Res. 17:175-183(2007).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
DOI=10.1371/journal.pbio.0030038; PubMed=15685292 [NCBI, ExPASy, EBI, Israel, Japan]
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
DOI=10.1126/science.1081288; PubMed=12869764 [NCBI, ExPASy, EBI, Israel, Japan]
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.";
Science 301:376-379(2003).
[7]
REVIEW, GENE FAMILY, AND NOMENCLATURE.
DOI=10.1016/j.tplants.2004.02.004; PubMed=15063870 [NCBI, ExPASy, EBI, Israel, Japan]
Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.;
"Plant actin-related proteins.";
Trends Plant Sci. 9:196-202(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
EU214983; ABW90794.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU214984; ABW90795.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU214985; ABW90796.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU214986; ABW90797.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU214987; ABW90798.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU214988; ABW90799.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215015; ABW90826.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215016; ABW90827.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215017; ABW90828.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215018; ABW90829.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215019; ABW90830.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215020; ABW90831.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215021; ABW90832.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215022; ABW90833.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215023; ABW90834.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215024; ABW90835.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215025; ABW90836.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215026; ABW90837.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215027; ABW90838.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215028; ABW90839.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215029; ABW90840.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215030; ABW90841.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215031; ABW90842.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215032; ABW90843.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215033; ABW90844.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215034; ABW90845.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215035; ABW90846.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215036; ABW90847.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215037; ABW90848.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215038; ABW90849.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215039; ABW90850.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215041; ABW90852.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215042; ABW90853.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215043; ABW90854.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215044; ABW90855.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215045; ABW90856.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215046; ABW90857.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215047; ABW90858.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215048; ABW90859.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215049; ABW90860.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215050; ABW90861.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215051; ABW90862.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215052; ABW90863.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215053; ABW90864.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
EU215054; ABW90865.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL606619; CAE02800.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AL732340; CAJ86197.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CR855038; CAH65999.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AP008210; BAF16104.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
CM000141; EAZ32337.1; ALT_SEQ; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK100366; -; NOT_ANNOTATED_CDS; mRNA.[EMBL / GenBank / DDBJ]
RefSeq NP_001054190.1; -.
UniGene Os.9650
3D structure databases
ModBase Q7XR80.
Organism-specific databases
Gramene Q7XR80; -.
Family and domain databases
InterPro IPR004001; Actin_CS.
IPR004000; Actin_like.
IPR001810; F-box.
Graphical view of domain structure.
PANTHER PTHR11937; Actin_like; 1.
Pfam PF00022; Actin; 2.
PF00646; F-box; 1.
Pfam graphical view of domain structure.
SMART SM00268; ACTIN; 1.
SM00256; FBOX; 1.
SMART graphical view of domain structure.
PROSITE PS00406; ACTINS_1; FALSE_NEG.
PS00432; ACTINS_2; FALSE_NEG.
PS50181; FBOX; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q7XR80.
Genome annotation databases
GeneID 4337330; -.
KEGG osa:4337330; -.
Other
ProtoNet Q7XR80.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Structural protein.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom  To Length Description FTId
CHAIN   1   484  484     Actin-related protein 8. PRO_0000320545
DOMAIN   44    90  47     F-box. 
Sequence information
Length: 484 AA [This is the length of the unprocessed precursor] Molecular weight: 53293 Da [This is the MW of the unprocessed precursor] CRC64: B2D5677782F3F1E1 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAVLLRKVWG SVLARAAAGA APPEAFAAAA SPRRPQAAGE YGSLGALDVL PIDVLAQILR 

        70         80         90        100        110        120 
LLGPADAARS TAVCRAWRLL ASDNGLWAFF LRLGPDPWEL VVFAETHLGA GPALHPGLYY 

       130        140        150        160        170        180 
DSSPQLSFKH VYTRRAVVPG SIIVDGGSGY CKYGWSKYAA PSGRCATFLE FGNIESPMYA 

       190        200        210        220        230        240 
RLRHFLSTIY TRMQVKPSTQ PIIVVLPLCH SDDTESARAS RKQYRDTLYS VLFDMNVPAV 

       250        260        270        280        290        300 
CSVDQAVLAL YAAKRTSGIV VNIGFNATSI VPIFQGRVMH EIGVETVGQG ALKLTGFLKE 

       310        320        330        340        350        360 
LMQQRNITFE SLYTVRTIKE KLCYVAADYE AEKRKDTQAS CEVDGEGWFT LSEERFKTAE 

       370        380        390        400        410        420 
ILFQPQIGGV RAMGLHKAVS LCMDHCYNSE VFGDDNWYKT VVLSGGSSCL PGLSERLEKE 

       430        440        450        460        470        480 
LRELLPAHIS EGIRVIPPPF GTDSAWFGAK MISNVSTFTE AWCIKKKQFR QKTRRNGPSF 


VNVW 

Q7XR80 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA)
Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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