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UniProtKB/Swiss-Prot entry A9IWA2

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DDL_BART1
Primary accession number A9IWA2
Secondary accession numbers None
Integrated into Swiss-Prot on May 20, 2008
Sequence was last modified on February 5, 2008 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 7)
Name and origin of the protein
Protein name D-alanine--D-alanine ligase
Synonyms EC 6.3.2.4
D-alanylalanine synthetase
D-Ala-D-Ala ligase
Gene name
Name: ddl
OrderedLocusNames: BT1588
From
Bartonella tribocorum (strain CIP 105476 / IBS 506) [TaxID: 382640] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1038/ng.2007.38; PubMed=18037886 [NCBI, ExPASy, EBI, Israel, Japan]
Saenz H.L., Engel P., Stoeckli M.C., Lanz C., Raddatz G., Vayssier-Taussat M., Birtles R., Schuster S.C., Dehio C.;
"Genomic analysis of Bartonella identifies type IV secretion systems as host adaptability factors.";
Nat. Genet. 39:1469-1476(2007).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AM260525; CAK01927.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001609922.1; -.
3D structure databases
ModBase A9IWA2.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0008716; Molecular function: D-alanine-D-alanine ligase activity (inferred from electronic annotation from HAMAP).
GO:0009252; Biological process: peptidoglycan biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00047; -; 1.
PBIL [Tree]
InterPro IPR011761; ATP-grasp.
IPR013816; ATP_grasp_subdomain_2.
IPR005905; D_ala_D_ala.
IPR013817; Pre-ATP_grasp.
Graphical view of domain structure.
Gene3D G3DSA:3.30.470.20; ATP_grasp_subdomain_2; 1.
G3DSA:3.40.50.20; Pre-ATP_grasp; 1.
TIGRFAMs TIGR01205; D_ala_D_alaTIGR; 1.
PROSITE PS50975; ATP_GRASP; 1.
PS00843; DALA_DALA_LIGASE_1; 1.
PS00844; DALA_DALA_LIGASE_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS A9IWA2.
Genome annotation databases
GeneID 5829274; -.
GenomeReviews AM260525_GR; BT1588.
CMR A9IWA2; BT1588.
Other
ProtoNet A9IWA2.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Cell shape; Cell wall biogenesis/degradation; Complete proteome; Cytoplasm; Ligase; Magnesium; Manganese; Metal-binding; Nucleotide-binding; Peptidoglycan synthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   306  306     D-alanine--D-alanine ligase. PRO_1000074763
DOMAIN   102   300  199     ATP-grasp. 
NP_BIND   128   183  56     ATP (By similarity). 
METAL   253   253        Magnesium or manganese 1 (By similarity). 
METAL   267   267        Magnesium or manganese 1 (By similarity). 
METAL   267   267        Magnesium or manganese 2 (By similarity). 
METAL   269   269        Magnesium or manganese 2 (By similarity). 
Sequence information
Length: 306 AA [This is the length of the unprocessed precursor] Molecular weight: 33289 Da [This is the MW of the unprocessed precursor] CRC64: F4C9E32F42118FAC [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MKDKHIAVLM GGFSSERSIS LSSGAACADV LEEQGYRVSR VDVGAHIASV LEQLQPDIAF 

        70         80         90        100        110        120 
NALHGPFGED GRIQGILEYL KIPYTHSGVM ASALAMDKGR AKIIAANAGV CVAPSRIMNR 

       130        140        150        160        170        180 
FSIGKTHPME PPYVIKPVCE GSSFGVVIVQ ENEAVPPHNI GGSEWGYADE VMVEKYIPGR 

       190        200        210        220        230        240 
ELTCAVLGNE VLDVCEILPD QHFAFYDYDS KYKTGGSLHI CPAKLSLNIY QSVQRMSLAA 

       250        260        270        280        290        300 
HQAIGCRGVS RSDFRFDEKT GELVWLEINT QPGMTSTSLL PDIAKASGRT YGDIVQWMVE 


DASCMR
A9IWA2 in FASTA format

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