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UniProtKB/Swiss-Prot entry A7HH70

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DDL_ANADF
Primary accession number A7HH70
Secondary accession numbers None
Integrated into Swiss-Prot on June 10, 2008
Sequence was last modified on September 11, 2007 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 11)
Name and origin of the protein
Protein name D-alanine--D-alanine ligase
Synonyms EC 6.3.2.4
D-alanylalanine synthetase
D-Ala-D-Ala ligase
Gene name
Name: ddl
OrderedLocusNames: Anae109_3887
From
Anaeromyxobacter sp. (strain Fw109-5) [TaxID: 404589] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Anaeromyxobacter.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Fields M., Richardson P.;
"Complete sequence of Anaeromyxobacter sp. Fw109-5.";
Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000769; ABS28066.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001381050.1; -.
3D structure databases
ModBase A7HH70.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0008716; Molecular function: D-alanine-D-alanine ligase activity (inferred from electronic annotation from HAMAP).
GO:0009252; Biological process: peptidoglycan biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00047; -; 1.
PBIL [Tree]
InterPro IPR011761; ATP-grasp.
IPR013816; ATP_grasp_subdomain_2.
IPR000291; D-Ala_lig_Van_CS.
IPR005905; D_ala_D_ala.
IPR011095; Dala_Dala_lig_C.
IPR011127; Dala_Dala_lig_N.
IPR013817; Pre-ATP_grasp.
Graphical view of domain structure.
Gene3D G3DSA:3.30.470.20; ATP_grasp_subdomain_2; 2.
G3DSA:3.40.50.20; Pre-ATP_grasp; 1.
Pfam PF07478; Dala_Dala_lig_C; 1.
PF01820; Dala_Dala_lig_N; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01205; D_ala_D_alaTIGR; 1.
PROSITE PS50975; ATP_GRASP; 1.
PS00843; DALA_DALA_LIGASE_1; 1.
PS00844; DALA_DALA_LIGASE_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS A7HH70.
Genome annotation databases
GeneID 5377312; -.
GenomeReviews CP000769_GR; Anae109_3887.
KEGG afw:Anae109_3887; -.
NMPDR fig|404589.4.peg.3339; -.
CMR A7HH70; Anae109_3887.
Other
ProtoNet A7HH70.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Cell shape; Cell wall biogenesis/degradation; Complete proteome; Cytoplasm; Ligase; Magnesium; Manganese; Metal-binding; Nucleotide-binding; Peptidoglycan synthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   308  308     D-alanine--D-alanine ligase. PRO_0000341051
DOMAIN   105   302  198     ATP-grasp. 
NP_BIND   133   188  56     ATP (By similarity). 
METAL   256   256        Magnesium or manganese 1 (By similarity). 
METAL   269   269        Magnesium or manganese 1 (By similarity). 
METAL   269   269        Magnesium or manganese 2 (By similarity). 
METAL   271   271        Magnesium or manganese 2 (By similarity). 
Sequence information
Length: 308 AA [This is the length of the unprocessed precursor] Molecular weight: 32500 Da [This is the MW of the unprocessed precursor] CRC64: 1D2BF3F39C9B980F [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MGKWTGKKVA VLYGGRSSER EVSLRTGAAC ADALRARGHD VTLVDVDAEL PARLRELRVD 

        70         80         90        100        110        120 
VAFVALHGRW GEDGCVQGLL ECMGIPYTGS GVTASAMGMD KTVSKAIFKA LGLDVIEYRA 

       130        140        150        160        170        180 
FPPARAAEID LRDLPFGVPC VVKPAGEGSS VGVQIVKDAA RLADACREAA RYKGDVVVER 

       190        200        210        220        230        240 
YVKGTEVNVA VLEGKALGAI EIAPANEFYD YAAKYTAGTT RYYYPARIPE AHASRVMAAA 

       250        260        270        280        290        300 
EAAHRGLGCS GVTRVDFIVA PDGTPFILEV NTLPGMTATS LVPKIAAGLG LAFPELCERI 


LDGAALKA
A7HH70 in FASTA format

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