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UniProtKB/Swiss-Prot entry A6VQN1

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DDL_ACTSZ
Primary accession number A6VQN1
Secondary accession numbers None
Integrated into Swiss-Prot on February 26, 2008
Sequence was last modified on August 21, 2007 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 12)
Name and origin of the protein
Protein name D-alanine--D-alanine ligase
Synonyms EC 6.3.2.4
D-alanylalanine synthetase
D-Ala-D-Ala ligase
Gene name
Name: ddl
OrderedLocusNames: Asuc_1930
From
Actinobacillus succinogenes (strain ATCC 55618 / 130Z) [TaxID: 339671] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Vieille C., Richardson P.;
"Complete sequence of Actinobacillus succinogenes 130Z.";
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000746; ABR75278.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001345213.1; -.
3D structure databases
ModBase A6VQN1.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0008716; Molecular function: D-alanine-D-alanine ligase activity (inferred from electronic annotation from HAMAP).
GO:0009252; Biological process: peptidoglycan biosynthetic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00047; -; 1.
PBIL [Tree]
InterPro IPR011761; ATP-grasp.
IPR013816; ATP_grasp_subdomain_2.
IPR000291; D-Ala_lig_Van_CS.
IPR005905; D_ala_D_ala.
IPR011095; Dala_Dala_lig_C.
IPR011127; Dala_Dala_lig_N.
IPR013817; Pre-ATP_grasp.
Graphical view of domain structure.
Gene3D G3DSA:3.30.470.20; ATP_grasp_subdomain_2; 2.
G3DSA:3.40.50.20; Pre-ATP_grasp; 1.
Pfam PF07478; Dala_Dala_lig_C; 1.
PF01820; Dala_Dala_lig_N; 1.
Pfam graphical view of domain structure.
TIGRFAMs TIGR01205; D_ala_D_alaTIGR; 1.
PROSITE PS50975; ATP_GRASP; 1.
PS00843; DALA_DALA_LIGASE_1; 1.
PS00844; DALA_DALA_LIGASE_2; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS A6VQN1.
Genome annotation databases
GeneID 5348933; -.
GenomeReviews CP000746_GR; Asuc_1930.
KEGG asu:Asuc_1930; -.
CMR A6VQN1; Asuc_1930.
Other
ProtoNet A6VQN1.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
ATP-binding; Cell shape; Cell wall biogenesis/degradation; Complete proteome; Cytoplasm; Ligase; Magnesium; Manganese; Metal-binding; Nucleotide-binding; Peptidoglycan synthesis.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   307  307     D-alanine--D-alanine ligase. PRO_1000071100
DOMAIN   105   304  200     ATP-grasp. 
NP_BIND   135   190  56     ATP (By similarity). 
METAL   258   258        Magnesium or manganese 1 (By similarity). 
METAL   271   271        Magnesium or manganese 1 (By similarity). 
METAL   271   271        Magnesium or manganese 2 (By similarity). 
METAL   273   273        Magnesium or manganese 2 (By similarity). 
Sequence information
Length: 307 AA [This is the length of the unprocessed precursor] Molecular weight: 33644 Da [This is the MW of the unprocessed precursor] CRC64: 2FD6EFD953622A42 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MKSLKQQKIA VLLGGTASER EVSLNSGAAV LDALRSQGYD AHPVDPKDMP VADLKQQGFE 

        70         80         90        100        110        120 
RVFNILHGRG GEDGVIQGVL EQIGLPYTGC GVMTSALTMD KMRTKMLWKG FGLPIADMEI 

       130        140        150        160        170        180 
VTKNTALSLE PQAIVARLGL PLMVKPSREG SSVGLTKVDS ADKLKSAVDL ALKFDDIVLI 

       190        200        210        220        230        240 
EEWLSGDELT VPVLGDEVLP AVQIVPEGEF YDYNAKYISD NTRYICPMPM SDERWDELKN 

       250        260        270        280        290        300 
LVKRAYEAVG CRGWSRIDVM TDSEGNFRLI EVNTTPGMTS HSLFPKSAAT VGYSFEKLVE 


KILELSV
A6VQN1 in FASTA format

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