ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
Search for

HAMAP: Xanthomonas campestris pv. campestris (strain B100) complete proteome

General information

Species:  Xanthomonas campestris pv. campestris (strain B100)
Species code: XANCB
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas (TaxID: 509169) [NEWT/ NCBI]
Description: Xanthomonas campestris pv. campestris causes black rot, which affects crucifers such as Brassica and Arabidopsis. Symptoms include marginal leaf chlorosis and darkening of vascular tissue, accompanied by extensive wilting and necrosis. Xanthomonas campestris pv. campestris (strain B100) has been employed as a model strain to investigate the biosynthesis of cell wall polysaccharides. Its genome is made up of a single circular chromosome of 5079003 base pairs with 4471 protein-coding genes.
Properties: Presence of flagella: Yes
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of XANCB entries in the UniProt Knowledgebase: 4410 (39 in UniProtKB/Swiss-Prot + 4371 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    B100
Genome structure:
Chromosome EMBL accession number AM920689 (circular; 5,079,002 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=18304669; [ NCBI , EBI , Israel , Japan ]
Vorhoelter F.-J., Schneiker S., Goesmann A., Krause L., Bekel T., Kaiser O., Linke B., Patschkowski T., Rueckert C., Schmid J., Sidhu V.K., Sieber V., Tauch A., Watt S.A., Weisshaar B., Becker A., Niehaus K., Puehler A. ;
"The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.";
J. Biotechnol. 134:33-45(2008).
Web links:
Official genome site(s):
http://www.genetik.uni-bielefeld.de/genomikplus/index.php?Itemid=53&id=52&option=com_content&task=view
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=29801
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Xcam_B100
 EBI Proteome Analysis page



Tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us HAMAP Swiss-Prot
 Hosted by ch flag SIB Switzerland Mirror sites: Australia  Brazil  Canada  China  Korea
Search for