Species code:	SALPA
Taxonomy:	Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella (TaxID: 54388) [NEWT/ NCBI]
Description:	Salmonella enterica serovar Paratyphi A is the second most prevalent cause of typhoid after S.enterica serovar Typhi. It is responsible for at least one third of cases in southern and eastern Asia. Paratyphi A causes a milder disease than Typhi but has been particularly virulent in some outbreaks. Typhi and Paratyphi A are members of different O antigen serogroups, D1 and A. The genome of Paratyphi A is smaller than the genomes of the two Typhi genomes, mainly because it has fewer prophages or other mobile elements. There are 173 peudogenes in Paratyphi A, usually caused by single-base mutations that lead to a frameshift or a stop codon.
Properties:	Presence of flagella: Yes Interaction: Animal pathogen in Mammalia Number of membranes: 2 Number of inteins:0
Statistics:	Number of SALPA entries in the UniProt Knowledgebase: 4083 (915 in UniProtKB/Swiss-Prot + 3168 in UniProtKB/TrEMBL)

Genome structure:	Chromosome EMBL accession number CP000026 (circular; 4,585,229 bp) (download entry) (download Genome Reviews).
Reference(s):	[1] PubMed=15531882; [ NCBI , EBI , Israel , Japan ] McClelland M., Sanderson K.E., Clifton S.W., Latreille P., Porwollik S., Sabo A., Meyer R., Bieri T., Ozersky P., McLellan M., Harkins C.R., Wang C., Nguyen C., Berghoff A., Elliott G., Kohlberg S., Strong C., Du F., Carter J., Kremizki C., Layman D., Leonard S., Sun H., Fulton L., Nash W., Miner T., Minx P., Delehaunty K., Fronick C., Magrini V., Nhan M., Warren W., Florea L., Spieth J., Wilson R.K. ; "Comparison of genome degradation in Paratyphi A and Typhi, human-restricted serovars of Salmonella enterica that cause typhoid."; Nat. Genet. 36:1268-1274(2004).
Web links:	CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Salmonella&GLspecies=enterica&GLstrain=ATCC9150 Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid295319%5Borgn%5D ERIC: http://www.ericbrc.org/portal/eric/salmonellaparatyphiaatcc9150 GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Sent_PARATYPIA_ATCC9150 Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Salmonella_paratyphi.html PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p13086_Sal_enter TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntse05  EBI Proteome Analysis page

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