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HAMAP: Rhizobium loti (Mesorhizobium loti) complete proteome

General information

Species:  Rhizobium loti (Mesorhizobium loti)
Species code: RHILO
Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium (TaxID: 381) [NEWT/ NCBI]
Description: Gram-negative nitrogen-fixing bacteria living in soil and able to establish a symbiosis with host plants from the genera Lotus, Anthyllis and Lupinus leading to the formation of nodules on roots. Nodulation and nitrogen fixation genes of Mesorhizobium loti are encoded on the chromosome of the bacterium.
Properties: Presence of flagella: Yes
Interaction: Plant symbiont
Number of membranes: 2
Number of inteins:0
Statistics: Number of RHILO entries in the UniProt Knowledgebase: 7255 (598 in UniProtKB/Swiss-Prot + 6657 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    MAFF303099
Genome structure:
• Chromosome EMBL accession number BA000012 (circular; 7,036,071 bp) (download entry) (download Genome Reviews).
• Plasmid pMLa EMBL accession number BA000013 (circular; 351,911 bp) (download entry) (download Genome Reviews).
• Plasmid pMLb EMBL accession number AP003017 (circular; 208,315 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=21082930; PubMed=11214968; [ NCBI , EBI , Israel , Japan ]
Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y., Nakayama S., Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M., Tabata S. ;
"Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.";
DNA Res. 7:331-338(2000).
[2] MEDLINE=21082936; PubMed=11214974; [ NCBI , EBI , Israel , Japan ]
Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S., Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y., Nakayama S., Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M., Tabata S. ;
"Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti (supplement).";
DNA Res. 7:381-406(2000).
Web links:
Official genome site(s):
http://bacteria.kazusa.or.jp/rhizobase/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Mesorhizobium&GLspecies=loti&GLstrain=MAFF303099
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid266835%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Mlot_MAFF303099
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p18_Mes_loti
RhizoDB: http://xbase.bham.ac.uk/rhizodb/genome.pl?id=1152
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntml02
 EBI Proteome Analysis page



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