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HAMAP: Geobacter sulfurreducens complete proteome

General information

Species:  Geobacter sulfurreducens
Species code: GEOSL
Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter (TaxID: 35554) [NEWT/ NCBI]
Description: Geobacter species plays a role in the bioremediation of organic contaminants and radioactive metals in subsurface environments as well as in harvesting electricity from aquatic sediments and other waste organic material.
Properties: Presence of flagella: Yes
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of GEOSL entries in the UniProt Knowledgebase: 3415 (387 in UniProtKB/Swiss-Prot + 3028 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 51573 / DSM 12127 / PCA
Genome structure:
Chromosome EMBL accession number AE017180 (circular; 3,814,139 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=14671304; [ NCBI , EBI , Israel , Japan ]
Methe B.A., Nelson K.E., Eisen J.A., Paulsen I.T., Nelson W.C., Heidelberg J.F., Wu D., Wu M., Ward N.L., Beanan M.J., Dodson R.J., Madupu R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn M.L., Kolonay J.F., Sullivan S.A., Haft D.H., Selengut J., Davidsen T.M., Zafar N., White O., Tran B., Romero C., Forberger H.A., Weidman J.F., Khouri H.M., Feldblyum T.V., Utterback T.R., Van Aken S.E., Lovley D.R., Fraser C.M. ;
"Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.";
Science 302:1967-1969(2003).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Geobacter&GLspecies=sulfurreducens&GLstrain=PCA
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid243231%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Gsul_PCA
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Geobacter_sulfurreducens.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p192_Geo_sulfu
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ggs
 EBI Proteome Analysis page



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