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HAMAP: Chlamydophila caviae complete proteome

General information

Species:  Chlamydophila caviae
Species code: CHLCV
Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila (TaxID: 83557) [NEWT/ NCBI]
Description: C.caviae infects the conjunctiva of guinea-pigs. C.caviae is markedly specific for guinea-pigs as attempts to infect mice, rabbits and gerbils have been unsuccessful.
Properties: Presence of flagella: No
Interaction: Animal pathogen in Mammalia (intracellular obligate)
Number of membranes: 2
Number of inteins:0
Statistics: Number of CHLCV entries in the UniProt Knowledgebase: 1005 (266 in UniProtKB/Swiss-Prot + 739 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    GPIC
Genome structure:
• Chromosome EMBL accession number AE015925 (circular; 1,173,390 bp) (download entry) (download Genome Reviews).
• Plasmid pCpGP1 EMBL accession number AE015926 (circular; 7,966 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22569155; PubMed=12682364; [ NCBI , EBI , Israel , Japan ]
Read T.D., Myers G.S.A., Brunham R.C., Nelson W.C., Paulsen I.T., Heidelberg J.F., Holtzapple E.K., Khouri H.M., Federova N.B., Carty H.A., Umayam L.A., Haft D.H., Peterson J.D., Beanan M.J., White O., Salzberg S.L., Hsia R.-C., McClarty G., Rank R.G., Bavoil P.M., Fraser C.M. ;
"Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae.";
Nucleic Acids Res. 31:2134-2147(2003).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Chlamydia&GLspecies=caviae&GLstrain=GPIC
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid227941%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Ccav_GPIC
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Chlamydia_caviae.html
NMPDR: http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?pattern=227941.1;page=SearchResult
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p228_Chl_cavia
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=gcp
 EBI Proteome Analysis page



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