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HAMAP: Bordetella parapertussis complete proteome

General information

Species:  Bordetella parapertussis
Species code: BORPA
Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella (TaxID: 519) [NEWT/ NCBI]
Description: Bordetella parapertussis infects both sheep and humans. In human infants it causes whooping cough.
Properties: Presence of flagella: No
Human pathogen: Yes
Interaction: Animal pathogen in Mammalia
Number of membranes: 2
Number of inteins:0
Statistics: Number of BORPA entries in the UniProt Knowledgebase: 4161 (506 in UniProtKB/Swiss-Prot + 3655 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    12822 / ATCC BAA-587 / NCTC 13253
Genome structure:
Chromosome EMBL accession number BX470249 (circular; 4,773,551 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22827954; PubMed=12910271; [ NCBI , EBI , Israel , Japan ]
Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. ;
"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.";
Nat. Genet. 35:32-40(2003).
Web links:
Official genome site(s):
http://www.sanger.ac.uk/Projects/B_pertussis/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Bordetella&GLspecies=parapertussis&GLstrain=12822
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid257311%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bpar_12822
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Bordetella_parapertussis.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p25_Bor_parap
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntbp02
 EBI Proteome Analysis page



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