• Visual Guidance
• • DNA
  • RNA
  • Protein
  • Cell
  • Organism
  • Population
• Categories
• • proteomics
  • • protein sequences and identification
    • mass spectrometry and 2-DE data
    • protein characterisation and function
    • families, patterns and profiles
    • post-translational modification
    • protein structure
    • protein-protein interaction
    • similarity search/alignment
  • genomics
  • • sequence alignment
    • similarity search
    • characterisation/annotation
  • structural bioinformatics
  • systems biology
  • phylogeny/evolution
  • population genetics
  • transcriptomics
  • biophysics
  • imaging
  • IT infrastructure
  • drug design
• Resources A..Z
• Links/Documentation

Status for resource: SIM

URL: http://web.expasy.org/sim/

Current status:

Has been up since 25/4/12.

Embrace tests: not tested.

Description: SIM finds a user-defined number of best non-intersecting alignments between two protein sequences or within a sequence. Results can be viewed with LALNVIEW, a graphical viewer program for pairwise alignments.