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Showing 5 records out of 25 total
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SWISS-2DPAGE [SIB: Swiss-Prot group]
[download] UP
Categories: proteomics, (mass spectrometry and 2-DE data) - Software type(s): website - database
The SWISS-2DPAGE database assembles data on proteins identified on various 2-D PAGE and SDS-PAGE maps. Each SWISS-2DPAGE entry contains textual data on one protein, including mapping procedures, physiological and pathological information, experimental data and bibliographical references. In addition several 2-D PAGE and SDS-PAGE images are provided, showing the experimentally determined location of the protein, as well as a theoretical region where the protein might be found in the gel.
keywords: gel electrophoresis, isoelectric point (pI), mass spectrometry (MS, MS/MS, LC-MS), molecular weight (MW), peptide mass fingerprinting, post-translational modification (PTM), protein identification, proteome database
World-2DPAGE Constellation [SIB: Swiss-Prot group]
UP
Categories: proteomics, (mass spectrometry and 2-DE data) - Software type(s): website - database
Entry point to the World2D-PAGE Repository, the World-2DPAGE Portal (a dynamic portal to simultaneously query world-wide gel-based proteomics databases), Swiss-2DPAGE, Make2D-DB II, MiapeGelDB, Melanie Viewer, 2D-PAGE Submission Process and the 2D-PAGE list of resources.
keywords: gel electrophoresis, isoelectric point (pI), mass spectrometry (MS, MS/MS, LC-MS), molecular weight (MW), protein identification, proteome database
World-2DPAGE Repository [SIB: Swiss-Prot group]
UP
Categories: proteomics, (mass spectrometry and 2-DE data) - Software type(s): website - database
World-2DPAGE is a public repository, standards compliant, for gel-based proteomics data published in the literature
keywords: gel electrophoresis, isoelectric point (pI), mass spectrometry (MS, MS/MS, LC-MS), molecular weight (MW), proteome database
xComb [University of Washington]
Categories: proteomics, (mass spectrometry and 2-DE data) - Software type(s): website - tool
Computes all possible crosslinks based on proteins of interest (max. 30 proteins) for further interrogation using standard search engine (e.g. Phenyx, Mascot, Sequest, OMSSA, X!Tandem)
keywords: disease mutation, mass spectrometry (MS, MS/MS, LC-MS), peptide fragment fingerprinting
xQuest [ETHZ]
Categories: proteomics, (mass spectrometry and 2-DE data) - Software type(s): website - tool
xQuest is a search engine for cross-linked peptides from complex samples. xQuest works with small and large protein databases and features flexible fragment ion assignment, advanced scoring, and interactive evaluation tools.
keywords: mass spectrometry (MS, MS/MS, LC-MS), peptide fragment fingerprinting
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