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Patterns with a high probability of occurrence


Some PROSITE entries such as those describing commonly found post-translational modifications or compositionally biased regions are found in the majority of known protein sequences. While it is generally useful to note their presence, some programs may want, in some cases, to ignore those entries. For this purpose these entries are indicated with the following qualifier in their CC lines:/SKIP-FLAG=TRUE>;

PS00001; ASN_GLYCOSYLATION
PS00004; CAMP_PHOSPHO_SITE
PS00005; PKC_PHOSPHO_SITE
PS00006; CK2_PHOSPHO_SITE
PS00007; TYR_PHOSPHO_SITE
PS00008; MYRISTYL
PS00009; AMIDATION
PS00016; RGD
PS00017; ATP_GTP_A
PS00029; LEUCINE_ZIPPER
PS00294; PRENYLATION
PS00342; MICROBODIES_CTER
PS50079; NLS_BP
PS50099; PRO_RICH
PS50310; ALA_RICH
PS50311; CYS_RICH
PS50312; ASP_RICH
PS50313; GLU_RICH
PS50314; PHE_RICH
PS50315; GLY_RICH
PS50316; HIS_RICH
PS50317; ILE_RICH
PS50318; LYS_RICH
PS50319; LEU_RICH
PS50320; MET_RICH
PS50321; ASN_RICH
PS50322; GLN_RICH
PS50323; ARG_RICH
PS50324; SER_RICH
PS50325; THR_RICH
PS50326; VAL_RICH
PS50327; TRP_RICH
PS50328; TYR_RICH
Last modified 29-Apr-2008 by COL

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