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PROSITE entry PS51762


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PURL: https://purl.expasy.org/prosite/signature/PS51762

Direct ScanProsite submission
General information about the entry

Entry name [info] GH16_2
Accession [info] PS51762
Entry type [info] MATRIX
Date [info] 01-JUN-2015 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00794
Associated ProRule [info] PRU01098

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 16 (GH16) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=224;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=219;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.9654503; R2=0.0058318; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=27833.1601562; R2=9.5674887; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=1378; H_SCORE=41017; N_SCORE=9.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=950; H_SCORE=36922; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-15; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 128 in 128 different sequences
Number of true positive hits 128 in 128 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] GH16
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
128 sequences

AGAA_MICTH  (Q6F4N4), AGAA_ZOBGA  (G0L322), AGAB_ZOBGA  (Q9RGX8), 
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PDB
[Detailed view]
38 PDB

1AJK; 1AJO; 1AXK; 1BYH; 1CPM; 1CPN; 1DYP; 1GBG; 1GLH; 1MAC; 1MVE; 1O4Y;
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