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PROSITE entry PS51752


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PURL: https://purl.expasy.org/prosite/signature/PS51752

Direct ScanProsite submission
General information about the entry

Entry name [info] JACALIN_LECTIN
Accession [info] PS51752
Entry type [info] MATRIX
Date [info] 01-MAR-2015 CREATED;
01-MAR-2015 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51752
Associated ProRule [info] PRU01088

Name and characterization of the entry

Description [info] Jacalin-type lectin domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=141;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=141;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.8304603; R2=0.0093792; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=712; N_SCORE=9.5; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=392; N_SCORE=6.5; MODE=1; TEXT='RR';
/DEFAULT: M0=-30; D=-200; I=-200; B1=-1000; E1=-1000; MI=-505; MD=-505; IM=-505; DM=-505;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 166 in 81 different sequences
Number of true positive hits 166 in 81 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 5
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] jacalin-type lectin
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
81 sequences

AEP1_DANRE  (Q5CZR5), FBK75_ARATH (Q9M1A7), GOS9_ORYSI  (A2WMH2), 
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PDB
[Detailed view]
79 PDB

1JAC; 1JOT; 1KU8; 1KUJ; 1M26; 1OUW; 1PXD; 1TOQ; 1TP8; 1UGW; 1UGX; 1UGY;
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