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PROSITE entry PS51740


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51740
Entry name [info] SPOVT_ABRB
Accession [info] PS51740
Entry type [info] MATRIX
Date [info] 01-DEC-2014 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51740
Associated ProRule [info] PRU01076

Name and characterization of the entry

Description [info] SpoVT-AbrB domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=45;
/DISJOINT: DEFINITION=PROTECT; N1=5; N2=41;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1503313; R2=0.0094484; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=5268.0073242; R2=0.6014235; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=778; H_SCORE=5736; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=461; H_SCORE=5545; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-47; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 931 in 489 different sequences
Number of true positive hits 931 in 489 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] SpoVT-AbrB
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
489 sequences

ABH_BACSU   (P39758), ABRB_BACSU  (P08874), CHPS_ECOLI  (P08365), 
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PDB
[Detailed view]
20 PDB

1MVF; 1N0E; 1N0F; 1N0G; 1UB4; 1YFB; 1YSF; 1Z0R; 2FY9; 2K1N; 2MRN; 2MRU;
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