PROSITE logo

PROSITE entry PS51728


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51728
Entry name [info] RTT109_HAT
Accession [info] PS51728
Entry type [info] MATRIX
Date [info] 01-JUL-2014 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51728
Associated ProRule [info] PRU01064

Name and characterization of the entry

Description [info] Rtt109-type histone acetyltransferase (HAT) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=373;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=368;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2920060; R2=0.0058039; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=63463.1445312; R2=15.7928858; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=1673; H_SCORE=89885; N_SCORE=12.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=726; H_SCORE=74929; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-43; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
» more

Post-processing [info]

COMPETES_HIT_WITH PS51726; PS51727

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 5 in 5 different sequences
Number of true positive hits 5 in 5 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Rtt109-type HAT
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
5 sequences

RT109_ASPFL (A0A364LXP7), RT109_CANAL (Q5AAJ8), RT109_PNECA (D3G9N3), 
» more

PDB
[Detailed view]
16 PDB

2RIM; 2ZFN; 3CZ7; 3Q33; 3Q35; 3Q66; 3Q68; 3QM0; 6O22; 7BWZ; 7BX0; 7BX1;
» more