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PROSITE entry PS51721


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51721
Entry name [info] G_CP
Accession [info] PS51721
Entry type [info] MATRIX
Date [info] 01-JUN-2014 CREATED;
12-AUG-2020 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51721
Associated ProRule [info] PRU01058

Name and characterization of the entry

Description [info] Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=157;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=152;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.5244374; R2=0.0082906; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=3556; N_SCORE=32.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=480; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-58; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51705; PS51706; PS51709; PS51710; PS51711; PS51712; PS51713; PS51714; PS51715; PS51716; PS51717; PS51718; PS51719; PS51720; PS51722

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 387 in 387 different sequences
Number of true positive hits 387 in 387 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] CP-type G
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
387 sequences

BPG2_ARATH  (Q8W4I6), DGP2_ARATH  (O82497), DGP3_ARATH  (Q8H1F6), 
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PDB
[Detailed view]
100 PDB

1PUJ; 1T9H; 1U0L; 2RCN; 2YKR; 2YV5; 3CNL; 3CNN; 3CNO; 3JCT; 4A2I; 5NO2;
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