PROSITE logo

PROSITE entry PS51718


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51718
Entry name [info] G_DYNAMIN_2
Accession [info] PS51718
Entry type [info] MATRIX
Date [info] 01-MAY-2014 CREATED;
07-APR-2021 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00362
Associated ProRule [info] PRU01055

Name and characterization of the entry

Description [info] Dynamin-type guanine nucleotide-binding (G) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=273;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=268;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0734248; R2=0.0082282; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=47981.0000000; R2=0.0000000; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=1572; H_SCORE=47981; N_SCORE=15.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=538; H_SCORE=47981; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-32; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
» more

Post-processing [info]

COMPETES_HIT_WITH PS51705; PS51706; PS51709; PS51710; PS51711; PS51712; PS51713; PS51714; PS51715; PS51716; PS51717; PS51719; PS51720; PS51721; PS51722

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 130 in 130 different sequences
Number of true positive hits 130 in 130 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.48 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Dynamin-type G
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
130 sequences

ARC5_ARATH  (Q84N64), BDLP_NOSP7  (B2IZD3), CRFC_ECOLI  (P0DM85), 
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

DLP2_CAMJJ  (A0A0H3PJK4), DYNA_BACSU  (P54159)

		
PDB
[Detailed view]
80 PDB

1JWY; 1JX2; 2AKA; 2J68; 2J69; 2QPT; 2W6D; 2X2E; 2X2F; 3L43; 3SNH; 3SZR;
» more