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PROSITE entry PS51678


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PURL: https://purl.expasy.org/prosite/signature/PS51678

Direct ScanProsite submission
General information about the entry

Entry name [info] SAM_MT_PRMT
Accession [info] PS51678
Entry type [info] MATRIX
Date [info] 01-JUL-2013 CREATED;
01-JUL-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51555
Associated ProRule [info] PRU01015

Name and characterization of the entry

Description [info] SAM-dependent methyltransferase PRMT-type domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=313;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=313;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2801752; R2=0.0087699; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=3161; N_SCORE=30.0; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=482; N_SCORE=6.5; MODE=1; TEXT='RR';
/DEFAULT: M0=-39; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 147 in 116 different sequences
Number of true positive hits 147 in 116 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] SAM-dependent MTase PRMT-type
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
116 sequences

ANM10_ARATH (Q9MAT5), ANM10_ORYSI (A2Y953), ANM10_ORYSJ (Q9SNQ2), 
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PDB
[Detailed view]
218 PDB

1F3L; 1G6Q; 1OR8; 1ORH; 1ORI; 2FYT; 2V74; 2V7E; 2Y1W; 2Y1X; 3B3F; 3B3G;
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