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PROSITE entry PS51669


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51669
Entry name [info] 4FE4S_MOW_BIS_MGD
Accession [info] PS51669
Entry type [info] MATRIX
Date [info] 01-MAR-2013 CREATED;
07-APR-2021 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00392
Associated ProRule [info] PRU01004

Name and characterization of the entry

Description [info] Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=57;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=52;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1464889; R2=0.0093127; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=8443.6171875; R2=1.3742515; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=790; H_SCORE=9529; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=468; H_SCORE=9087; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-28; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 245 in 245 different sequences
Number of true positive hits 245 in 245 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.59 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] 4Fe-4S Mo/W bis-MGD-type
Version [info] 7

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
245 sequences

ARRA_CHRAT  (Q5Y818), ARRA_SHESA  (Q7WTU0), CLRA_IDEDE  (P60068), 
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UniProtKB/Swiss-Prot
False negative sequences
1 sequence

NASA_HALMT  (I3R634)

		
PDB
[Detailed view]
183 PDB

1AA6; 1FDI; 1FDO; 1H0H; 1KQF; 1KQG; 1OGY; 1Q16; 1R27; 1SIW; 1Y4Z; 1Y5I;
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