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PROSITE entry PS51664


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51664
Entry name [info] YCAO
Accession [info] PS51664
Entry type [info] MATRIX
Date [info] 01-JAN-2013 CREATED;
01-JAN-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51664
Associated ProRule [info] PRU00999

Name and characterization of the entry

Description [info] YcaO domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=366;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=361;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0031664; R2=0.0072633; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=964; N_SCORE=10.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=482; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-31; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 8 in 8 different sequences
Number of true positive hits 8 in 8 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] YcaO
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
8 sequences

MCBD_ECOLX  (P23186), Y1094_METJA (Q58494), Y1265_HAEIN (P44144), 
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PDB
[Detailed view]
9 PDB

4Q84; 4Q85; 4Q86; 6GOS; 6GRG; 6GRH; 6GRI; 6PE3; 6PEU