PROSITE entry PS51658

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General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS51658
Entry name [info]	BFN
Accession [info]	PS51658
Entry type [info]	MATRIX
Date [info]	01-OCT-2012 CREATED; 01-OCT-2013 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC51658
Associated ProRule [info]	PRU00991

Name and characterization of the entry

Description [info]

Bifunctional nuclease (BFN) domain profile.

Matrix / Profile [info]

/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=133;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=128;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1806850; R2=0.0089121; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=990; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=485; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-48; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;

...

                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='M';  M= -74,  -8, -12,  -9,  14, -96,   4, -82,  19,  17,  99, -57, -97, -62, -19, -88, -62, -89,-145,  52;
/M: SY='V';  M= -63, -12, -84,-101, -78,-161, -13,  52,  -4, -13,  30,-151, -25, -63, -26, -54, -70,  69,-155,  12;
/M: SY='E';  M= -41, -34, -11,  69,-156,-151, -29,-152,  34, -11,-142, -25,   6,  54,  26, -61, -24, -64,-158,-147;
/M: SY='M';  M=  21, -14, -65, -74, -30,-106, -50, -55, -90,  37,  85, -32, -61,-145,-149, -54, -22,  53,-155, -37;
/M: SY='E';  M= -40, -58,   9,  43,  -9, -65,  10, -35,  20, -66, -48,  21,-145,  22,   1,  20,  24,  -2, -61,  -9;
/M: SY='V';  M= -36,-150,-157, -51,  17,-160,-153,  52, -34,   9, -50, -76, -32,-150, -63, -65, -75,  72,-150,  14;
/M: SY='Q';  M=   6,-151, -18, -20, -24, -62,  25,   2,  35,  -3,  30, -27, -70,  41,   4,  -7, -38,  18, -18,  -7;
/M: SY='G';  M= -12, -17,  25, -14,-155,  71, -55,-156, -18, -90, -48,  10, -50,  -7, -10,  25,   2, -88,-156, -40;
/M: SY='V';  M= -31,-148,-161,-156,   6,-161,-155,  66,-152,  32,  23,-155,-156,-151, -60, -83, -66,  66,-153,-133;
/I:         I=-26; MI=0; MD=-67; IM=0; DM=-67;
/M: SY='R';  M=  29,-153, -23,   1,  12, -13,  30, -41, -27, -49,  -9,-137,-150,  14,  32,  27,  -5, -25,-153,   2; D=-26;
/I:         I=-26; DM=-67;
/M: SY='V';  M= -64,-151,-103, -58,   2, -73, -78,  42, -41,  27,  40, -62, -21, -88, -44, -15,  -1,  48, -12,   3; D=-26;
/I:         I=-26; DM=-67;
/M: SY='D';  M=  -3,-150,  64,  12, -21, -31, -19, -56, -46,  -7,  10, -19, -13, -42, -21,  34,   6,   1,  -8, -41;
/M: SY='P';  M= -11,-154,   4,  30, -29,   9, -72, -19, -33, -19,  12, -89,  53,  46, -21,  10,   6, -28,-154, -33;
/M: SY='P';  M= -16,-150,  -7, -37, -25,  11,-143,  18, -49,  -6,   9, -23,  46,  -6, -49,  22,  37,   0,-153, -11;
/M: SY='Q';  M=   9,-150,  28,  10, -52,  13, -16,-100, -13,-150,  -3,  32, -17,  42, -19,  42,  21, -55,-159,-144;
/M: SY='D';  M=  -8,-153,  40,  17,-154,  33, -22, -65, -12, -47, -32,  39,  23,  30,   0,  11, -28, -57,-158, -59;
/I:         I=-38; MI=0; MD=-97; IM=0; DM=-97;
/M: SY='M';  M=  12,-150, -35, -42, -40,  38, -12,  -7, -82, -26,  44,   0, -68,  44,  -3,  18,  10, -13,-152,  -2;
/M: SY='P';  M=  14, -55,-143, -99,  -8,  19,   3,-110,-139, -53, -61,   6,  95, -65, -26, -13, -32, -91, -17,  41;
/I:         I=-28; MD=-70;
/M: SY='V';  M=   1,  -1,-157, -85,   0, -61,-151,  34,-100,  10,  -9, -48, -34,-150, -55,-143, -22,  70,-151,  27; D=-28;
/I:         I=-28; MI=0; MD=-70; IM=0; DM=-70;
/M: SY='V';  M=  -5, -56,-160,-154, -37,-159,-152,  49,-151,  51,  50,-155,-155,-149, -67,-146,-135,  63,-154,-134;
/M: SY='V';  M= -66, -39,-157, -27,   8,-161,-152,  43, -78,  53,  -3,-154,-156,-149,-152, -69, -83,  67,-152, -56;
/M: SY='L';  M=-144, -12,-161,-154,  18,-162,-146, -16,-154,  92,  -7,-159,-161, -58,-152, -81, -90, -58,-146,-128;
/M: SY='R';  M= -46, -24, -88,  28, -81,  -2,  -1, -48,  51, -20,-137, -52, -85,  -7,  65, -12,   0, -14,-152, -12;
/M: SY='E';  M= -15,-153,  63,  64, -49, -62, -68, -19,-133,   6, -50,  -3, -21, -47,-140,  -5,  -3, -11,  46,-141;
/M: SY='E';  M=  -1,-152,  27,  69, -72, -44, -35, -39,  10, -13,  -3,  -5,   9,  -7, -44, -28, -20,  13,-157, -63;
/I:         I=-20; MD=-51;
/M: SY='D';  M= -25, -28,  58,  58,-161,  19, -69,-159,   4, -49,-151,  19, -56,  -1, -43,  -3, -39, -99,-165,-152; D=-20;
/I:         I=-20; MI=0; MD=-51; IM=0; DM=-51;
/M: SY='G';  M= -19, -60,  22,  23, -53,  59,  19, -74, -20, -69, -48, -13, -21, -10,  -7,  32,   8,-149,-156, -40;
/M: SY='D';  M=-100,-154,  60,  31, -65,   3,  21, -82,  16,-117, -71,  45,   9,  -6,  23,  -6,   6, -74,-160, -26;
/M: SY='R';  M= -57, -36, -45, -17, -32, -56, -12, -20,  35, -33,   5,   8, -65, -14,  81, -43,  17, -21,-151,   6;
/M: SY='V';  M= -30, -49, -75, -15,  23, -59, -15,   5,  -5,  -3,  37,-141, -20,  37,   0, -15,  11,  39,   7,  20;
/M: SY='L';  M= -91,-148,-159, -66,  38, -60, -42,  31,-151,  68,  10, -66,-158,-149, -44,-149,-138,  41,-146, -36;
/M: SY='P';  M=  16,-157, -77, -51,-151, -63,-145,-141, -52, -13,   8, -60, 112, -70,-148,  -8, -30, -28,-155, -38;
/M: SY='I';  M= -73,-152,-159, -73, -64,-163, -45,  96, -80,   4,  20,-152,-153,-149, -71, -73, -56,  36,-150,  -6;
/M: SY='W';  M= -21,-156,-153, -49,  42, -55, -66,  31,-103, -46, -10,  -7,  23, -39, -55, -27, -24,  14, 121,  40;
/M: SY='I';  M= -59,  43,-160,-156, -25, -94, -44,  85,-152, -32,   5, -69, -66,-152, -68,-146, -59,  64,-156,-136;
/M: SY='G';  M= -44,-153,  48, -43, -74,  80, -14, -79,-140, -64, -51,  12,  16,-138, -51,   5, -24, -57,-158,-149;
/M: SY='P';  M=  29,-151, -30,  18, -32,   2,  16, -17, -22, -11,  -2, -49,  57,  -6, -39, -21,   3,   5,-153, -16;
/M: SY='F';  M=   4, -12,  20,  32,  41, -53, -34, -22, -51,   1,  -4, -19,  22,   1, -28,  10,   6, -38,   8, -13;
/M: SY='E';  M= -38,-156,  23, 100,-154,-151,-134,   2, -65,-144,  31,-134,  -8,  12, -61, -54, -46, -35,-158,-147;
/M: SY='A';  M=  86, -47,-144, -35, -64,  12, -44,  -9, -25, -51, -68,-138,-145, -48,-143,  -6, -50,   1,-154,-145;
/I:         I=-45; MD=-115;
/M: SY='Q';  M=   6,-151,  -8,  13, -29, -71,  33,  -5, -55,  -8,  23,  -5, -65,  61,  13,  11,   1,  -3, -54, -10; D=-45;
/I:         I=-45; MI=-115; IM=-115; DM=-115;
/M: SY='S';  M=  60,-145, -49,  -7, -24, -39, -41, -30, -32, -25,  -8,  -9, -67,   6, -19,  60, -93, -28,-153, -44;
/M: SY='I';  M= -56,-151,-162,-157,  10,-164, -50,  92,-155,  46, -68,-155,-155, -49,-156,-150,-137,  11,-149,-130;
/M: SY='A';  M=  53,-147, -17, -41, -47, -22,  -3,  17, -34, -19,  15,  -3, -55,  21, -28,  30, -42,   3,-153, -22;
/M: SY='M';  M=  23, -34, -34, -55, -19, -66, -12, -11,   0,  33,  50,  17,-150, -32,  14,   6,  -2,   1,-152, -22;
/M: SY='A';  M=  60,  -9, -65,   5, -66,  12, -10, -39,  -6, -52,   2, -30, -66,  -1,  34, -15, -48,  -6,-152,  -3;
/I:         I=-38; MI=0; MD=-97; IM=0; DM=-97;
/M: SY='L';  M= -26, -48, -54, -35, -37, -77, -23,  22, -25,  70,  55,-148,-154,   6, -41, -38, -45, -13,-151,-133;
/M: SY='E';  M= -26, -36,  -8,  62,-155,   4, -21, -35, -20, -87, -41,  48, -36,  55,  18,  16, -52, -75,-158,-145;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='G';  M= -18, -38,  -7,   0,-156,  65,  42,-158,  11, -84,-146,  55, -66,   9,   7,  -3, -65,-154,-158,-146;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='E';  M=  -6, -32,  -3,  31,  -3, -60,   0,  23,  -7,   2,  12, -30, -51,  -4,  25, -71,   7,  24,-152, -12;
/M: SY='E';  M= -34,-153,  32,  46, -69, -84, -17, -34,  38, -55, -17, -70,  24,  19,  25,  16,  12, -21,-157, -88;
/I:         I=-17; MI=0; MD=-44; IM=0; DM=-44;
/M: SY='P';  M= -12,-158, -40, -22,  20, -39, -31,   3, -22, -37, -45, -13,  68, -18, -67,  13,  21, -30,-156, -19; D=-17;
/I:         I=-17; DM=-44;
/M: SY='P';  M=   1, -49, -33,  33, -72, -37, -57, -84, -41, -59, -24, -52,  84,  -3,  -1,  -9,  -5, -27,-162,-154; D=-17;
/I:         I=-17; DM=-44;
/M: SY='R';  M=-148, -53,-143, -23, -65,-158, -37, -79, -48, -64,-145, -56, -43, -21, 112, -51, -67,-155,-158,-144; D=-17;
/I:         I=-17; DM=-44;
/M: SY='P';  M= -87,-167,-143,  -3,-163, -62,-148, -69, -51, -70, -44, -31, 121,-142, -67, -21, -64,-155,-160,-160; D=-17;
/I:         I=-17; DM=-44;
/M: SY='M';  M= -94, -44, -26, -56,  12, -22,-142, -54,-144,  55,  81, -54,-152, -36, -24,  24,  29, -55,-152,-133; D=-17;
/I:         I=-17; DM=-44;
/M: SY='T';  M= -33,-145,-142, -79,-141, -64, -30,   8,-137, -14, -38,-133,  -5, -67,  -8,  -4,  98,  -6,  28, -66; D=-17;
/I:         I=-17; DM=-44;
/M: SY='H';  M= -67,-156, -62, -53,   9, -39, 129,-149, -50, -74, -51, -54,   1, -10,-134, -31, -11, -96, -23,  67;
/M: SY='D';  M= -53, -39, 108,  24,-161, -41, -27,-159, -39,-158,-154,  -3,-144,  10, -24,   0,-134, -59,-171,-147;
/M: SY='L';  M= -47,-146, -68,-153,  -3,-161,-147, -19,-154,  87, -27,-158,-160,-149,-152,-151, -82,  27,-148, -44;
/I:         I=-33; MI=0; MD=-84; IM=0; DM=-84;
/M: SY='M';  M= -38, -64,-161,-155,  55,-160, -32,  33,-152,  58,  72,-154,-157,-149,-152,-149, -32,   9,  15, -67; D=-33;
/I:         I=-33; DM=-84;
/M: SY='K';  M=   8, -82, -19, -29, -66, -36, -24,   5,  39,  -2, -14,  10,  11,-134,   8,   9,  -7,  25,  30, -35;
/M: SY='E';  M= -17, -39,  39,  55, -16, -59,   0,-102, -49, -72, -22,  46, -44,  26, -23,  45,  -6, -53,-159, -88;
/M: SY='I';  M=  -3, -65,-158,-153,  23,-157,-151,  55,-151,  37,  53,-151,-154, -63,-152, -45,  -7,  52,-151,-131;
/M: SY='L';  M= -16,  28,-159,-153,  20,-159,-150,  59, -44,  59,  26,-152,-156,-149,-151, -64, -29,  12,-149,-131;
/M: SY='E';  M= -19, -14,  43,  63,-157,  -2,   3, -91,  -1,-153,-146,  23,-142,  17,  28,   4,  19,-150,-160,-146;
/M: SY='A';  M=  43,-149, -36,  -7, -31, -11,   7, -77,  26, -42, -13,  -8, -61,  29,  25,  25,  -4, -22,   9, -70;
/M: SY='M';  M= -23, -38,-153, -38,  35, -57,  16,   0,-148,  65,  65, -37,-155, -63,-148, -43, -15, -35, -54,   1;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='G';  M= -46, -64,  50,  22,-158,  77, -32,-161,   2, -91, -42,  27,-144, -44, -45,  -7,-137,-156,-158,-150;
/I:         I=-45; MI=0; MD=-115; IM=0; DM=-115;
/M: SY='A';  M=  38, -40, -13, -42,   0,  24, -41,  28, -22, -28,   4, -60, -36, -55, -21, -19, -37,  18, -32,  34;
/I:         I=-33; MI=0; MD=-84; IM=0; DM=-84;
/M: SY='R';  M= -25,-153,  14,  36, -46, -52,  11, -45,  28, -64, -83, -61, -34,  19,  57,  28,  17, -30, -13,-140;
/M: SY='V';  M= -58, -37,-159, -96, -38,-160,-154,  54,-152,  44,   3, -58, -10, -74,-153, -76,-134,  72,-155,-135;
/M: SY='E';  M= -77,-152,  21,  59, -22, -64, -27, -59,  35,   7, -23, -69, -44,  -5,  18,   5,  16,  -4,-156,-140;
/I:         I=-33; MD=-84;
/M: SY='R';  M= -21,-156, -41,  34,-148,  -9,  25,-152,  36, -39,   3,   6,-147,  25,  70, -22,-139,-150,-151,  18; D=-33;
/I:         I=-33; MI=0; MD=-84; IM=0; DM=-84;
/M: SY='V';  M=  -7, -63,-101,-153,-131, -66, -48,  53,-151,  -5, -64,-153,-154,-151, -84,-143, -61,  90,-160,-138;
/M: SY='V';  M= -35, -17, -24,  37, -31, -88, -44,  18, -82,   4,-128, -27, -55, -87,  36, -35,   5,  57,-154,  -3;
/M: SY='I';  M=-141,-153,-162, -74,  -3, -84,-160, 104,-155,  -5,-114,-154,-153,-152,-158, -81,-135,  28,-151,-132;
/M: SY='D';  M= -87, -32,  65, -16,  -4,-144,  29, -47, -61,-143,-140,  45, -67, -39, -29,   3,  51,   8,  21,  33;
/M: SY='D';  M=  -1, -60,  69,  46,-156,  13, -36,-151,   2,-153,-147,  -6, -62, -21,  11,  21, -13, -16,-161, -79;
/M: SY='L';  M= -53, -48, -10,-146,   6, -67,  -8,  38, -26,  47,  34, -35, -61, -71,  -2, -28,-137,  26, -20,  30;
/M: SY='D';  M= -41,-154,  43,  32, -40, -32,   7,  13,  42, -64,-137, -33, -26,  14,  37, -46, -23,  10,-156, -60;
/M: SY='D';  M= -39, -48,  86,  56,-158,  15,  19, -97, -20, -89,-150,  17, -53,  -9, -69, -27, -66, -69,-164, -60;
/M: SY='G';  M=  -9,-151,  38,  14,-158,  71,   0,-158, -96,-157,-149,  44, -92,   0, -76,  14,  -2, -88,-159,-149;
/M: SY='T';  M= -12, -31,-145, -43,-138, -80,  -4,  44, -84, -39, -69, -60, -69,  -1, -18, -42,  76,  50,-159, -54;
/M: SY='Y';  M= -67,-153,-155,-153,  94, -14, -34, -47,-147, -31, -32,-149, -26, -44, -47,-145,-143, -43, -38,  99;
/M: SY='Y';  M= -36,   6, -46,-145,  51, -66, -16, -36,   5,  -8, -13,-143,-155, -44, -20, -37,   4, -14,-125, 103;
/M: SY='A';  M=  87,   5,-143,-139,-145,  -1,-142,-142,-140, -79,-139, -38,-145, -48,-144,  30,  -9, -40,-149,  27;
/M: SY='R';  M= -66, -36, -25,  16, -34,-147,  19,-108,   7, -20, -25,  -2,-146, -12,  65,  25,  46, -12,-154,  -5;
/M: SY='L';  M=  -8,-148,-160,-153, -58,-160,-151,  53,-153,  70, -19,-156,-157, -49,-153,-148, -90,  39,-150, -29;
/M: SY='Y';  M= -64, -32, -74,   4,  38,-156,  37,  19, -14, -14, -43,-144,-152, -48,  -7, -77,   3,  46, -46,  72;
/M: SY='L';  M=-142, -18, -27,-151,  44,-109,-146,  32, -53,  65, -18,   4,-158,-149,-150,-106, -56,  29,-145, -12;
/M: SY='E';  M=  -8,-150,  12,  43, -64,  -6, -80, -29,  24, -32, -16, -10,-144,   2,  29,  38,   2, -21,-155, -45;
/I:         I=-13; MD=-32;
/M: SY='Q';  M= -29, -58,  36, -42,  17,  -2,  30, -66,  35, -42, -31,   8, -43,  55,   5, -18,   1, -21,-155, -70; D=-13;
/I:         I=-13; MD=-32;
/M: SY='G';  M=  -5,-171, -38, -37,-170,  47, -35, -60, -24, -73,-162,   0,  30,-155, -40, -26, -89, -41,-172, -34; D=-13;
/I:         I=-13; MI=0; MD=-32; IM=0; DM=-32;
/M: SY='D';  M= -60, -50,  49,  21, -79,   5, -18, -86, -33, -99, -44,  19, -67, -46, -25,  -2, -35,-170,-182,-165; D=-13;
/I:         I=-13; DM=-32;
/M: SY='G';  M= -58,-158,  19,  -2, -64,  61, -78, -25,   7, -47,-151, -11, -50,-140, -16,  16,   0, -68,-163,-153; D=-13;
/I:         I=-13; DM=-32;
/M: SY='E';  M=-113, -45, -19,  50, -20, -21, -50,  -8,  22, -46,-143,  13,-148,  10,  27, -32,  29, -27,-158, -19; D=-13;
/I:         I=-13; DM=-32;
/M: SY='E';  M= -20,-154,-140,  45, -97,-113, -22,  14,   0,  17, -32, -38, -51,   7, -33, -33,  37,  10,-158, -20; D=-13;
/I:         I=-13; DM=-32;
/M: SY='H';  M= -27, -24, -37,  14,  -3,-154,  40,  38, -12,  22,  15, -25,-150, -34, -22, -62,   6,  35,   9, -11;
/M: SY='E';  M= -61,  -2,   7,  54, -25,-148, -19, -14,  -7, -35, -17, -41,  -6,   5,  30,  26,  21,   0,-154,  -3;
/M: SY='I';  M=-140, -15,-158,-152,  12,-162, -45,  69, -35,  36, -29,-151,-155, -76,   1,-146, -14,  49,-149, -16;
/M: SY='D';  M= -25,-156, 108, -19,-162,-141,-133,-159,  11,-159,-154,   5,  29, -43, -26, -34, -39,-156,-170,-148;
/M: SY='A';  M=  67,  65,-148,-143, -56, -86,-145,  -6,-143, -16,  48,-139,-148,-139,-147,  46, -43,   7,-155, -30;
/M: SY='R';  M= -51,-158,-142,-132, -62, -80,  -3,   7, -20,-146,-138, -55,-151,-121, 114, -40, -43, -56,-154,-139;
/M: SY='P';  M=   9,-160,-145,-136,-155, -79,-148, -24,-141, -56,-141,-147, 120,-143, -59, -59,   3, -12,-157,-154;
/M: SY='S';  M= -10,-142, -54,-135,-151, -38,-138,-149,-135, -88,-146, -63,-142,-128,-140, 112, -20, -75,-160,-144;
/M: SY='D';  M=-145,-158, 118,  19,-162,-144,  56,-162,-131, -82,-155,-115,-144,-129,-139,-133, -63,-159,-178,-143;
/M: SY='A';  M=  93,  31,-144,-140,-152,  17,-147, -51,-141,-107,-140,-137,-145,-137,-146,  26,-129, -67,-155,-149;
/M: SY='I';  M= -85, -45,-162,-157,-125,-164,-156,  89,-154,  35,  16,-155,-154,-151,-156,-149, -58,  45,-152, -41;
/M: SY='A';  M=  77,-143, -75,-142, -36,-137,-142, -19,-142,   1,   2,  24, -27,-139,-145,  -4, -72,  16, -21,  26;
/M: SY='L';  M= -68,-148, -58,-153,-121,-162,-148,  33,-154,  86,  19,-157,-159, -67,-152,-152,-139,   2,-150, -64;
/M: SY='A';  M= 100,  11,-144,-138,-153, -38,-146,-145,-140,-146,-140,-137,-144,-136,-145,  29,-128,-132,-154,-149;
/M: SY='L';  M= -15,-147, -72, -44, -42, -78,-148,  21, -75,  68,  24,-152,-155, -19, -33,-146, -48,  46,-152,-134;
/M: SY='R';  M= -11, -20, -42, -36,-141, -72,   2,   9,  11,  -2, -24, -68,-151, -19,  93,-138, -64, -41, -50,  14;
/M: SY='C';  M=  37,  41, -62, -54,  38, -26,   2, -79,-102,  11,  -9, -15,-150, -11, -23,   5,  33,  -4,-146,  23;
/M: SY='G';  M= -58,-153,  46,   9,-158,  54,  26,-158,  33,-157,-147,  52, -84,  28,  -8, -10,-135, -71,-159,-146;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='A';  M=  61,  55,-149,-142, -35,-143,-147,  12,  15,   3,  -8,-141,-149,-139,  -5,   1, -19,  24, -35, -79;
/M: SY='P';  M= -44,-165,  -9, -50,-162,-105,-145,-151, -63,-160,-148,-145, 127,-141, -68, -23, -27,-154,-158,-158;
/M: SY='I';  M=-140,-152,-163,-160, -32,-166,-161, 104,-156,  -3, -14,-155,-153,-153,-158,-150,-135,  36,-152,-133;
/M: SY='Y';  M= -48,-154, -86, -61,  71, -92,   6, -99, -35, -10,  29, -88,-156,  -3, -24, -50, -40,-136,  33, 105;
/M: SY='V';  M=  17,  46,-157,-152, -36, -91,-157,  48,-149, -79,  19,-150,-153,-150, -68, -97,  -4,  82,-159,-139;
/M: SY='S';  M=  20,-148,  36,  39,-148, -58,   4,-147, -10, -64, -77,  31, -30,-128,  -8,  42,  33, -46, -12,   1;
/M: SY='E';  M= -28,-156,  32,  72, -96, -98,-134, -62,  56,-118, -83, -26,   5,  12,  26, -27, -28, -79,-157,-146;
/M: SY='E';  M=  -9,-153,  17,  61, -99, -45,  27, -79,  42,-113, -84, -29, -37,  16,  11,  36, -30, -88, -25, -10;
/M: SY='V';  M= -65,-147, -57,-154, -50,-162,-154,  41,-153,  56,  14,-156,-157,-151,-153,-148,-134,  76,-155,-134;
/M: SY='L';  M=   1,-147,-158, -63,  31,-156,-148,  11,-101,  56,  52,-153,-155,-147,-150, -64, -31,  47,  28, -19;
/M: SY='D';  M=   7, -48,  67,  57,-152, -70, -37, -61,  -4, -33, -29,  23,-143,  23,   2,  -8, -22,-146,-159, -14;
/M: SY='E';  M= -11,-152,  -5,  53, -23, -23,   8, -48,   8, -16, -13, -18,-144,  47,  34,  12,  -7, -46,-154, -40;
/M: SY='A';  M=  56, -18, -26,  11, -71, -57, -16,-136, -69, -26, -11, -28, -67,  52,  -3,  12,  16,  15, -25, -88;
/M: SY='G';  M=  26, -31, -35,  10, -71,  54,-140, -49,  -2, -43,-141, -60, -33,  14, -19,  35, -24, -12,-152,   0;
/M: SY='I';  M= -25,   2,  -9,  -9, -22, -46, -61,  42, -29, -13,  11,   3,  10, -19, -25,   6,   4,  40, -14, -16;
/M: SY='P';  M=  -9,-153,  26,  19, -10, -76,-140,   3, -25,  -6,   9, -39,  46, -17,  -6,  11, -20,  12, -14,  20;
/M: SY='E';  M= -31,-153,   2,  39,  18, -54, -30,  24, -45,   5, -13,  11,   0,  -9, -52, -11, -25,  17,-150,  19;
/I:         E1=0; IE=-380; DE=-380;

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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.

Total number of hits	8 in 8 different sequences
Number of true positive hits	8 in 8 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Matrix type [info]	protein_domain
Scaling database [info]	reversed
Author [info]	CJA_Sigrist
Feature key [info]	DOMAIN
Feature description [info]	BFN
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

8 sequences

BBD1_ARATH  (Q9FWS6), BBD1_ORYSI  (B8A8D2), BBD1_ORYSJ  (Q5N8J3),

BBD2_ARATH  (Q93VH2), BBD2_ORYSJ  (Q6YZM6), BBD_ORYMI   (Q09LL3), 
Y1829_MYCTO (P9WLR4), Y1829_MYCTU (P9WLR5)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment