PROSITE logo

PROSITE entry PS51656


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51656
Entry name [info] 4FE4S
Accession [info] PS51656
Entry type [info] MATRIX
Date [info] 01-AUG-2012 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51656
Associated ProRule [info] PRU00989

Name and characterization of the entry

Description [info] 4Fe-4S domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=60;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=55;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.6618776; R2=0.0096750; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=7979.3476562; R2=1.5019256; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=966; H_SCORE=9430; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=501; H_SCORE=8732; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-46; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 121 in 121 different sequences
Number of true positive hits 121 in 121 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] 4Fe-4S
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
121 sequences

ACDG1_METMA (Q8PZ09), ACDG1_METTE (Q50539), ACDG2_METMA (Q8PV87), 
» more

PDB
[Detailed view]
3 PDB

4DJD; 4DJE; 4DJF