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PROSITE entry PS51626


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PURL: https://purl.expasy.org/prosite/signature/PS51626

Direct ScanProsite submission
General information about the entry

Entry name [info] SAM_MT_TRM1
Accession [info] PS51626
Entry type [info] MATRIX
Date [info] 01-NOV-2011 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51555
Associated ProRule [info] PRU00958

Name and characterization of the entry

Description [info] Trm1 methyltransferase domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=381;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=376;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.5641465; R2=0.0073400; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=59129.0000000; R2=0.0000000; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=1286; H_SCORE=59129; N_SCORE=12.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=537; H_SCORE=59129; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-34; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 68 in 68 different sequences
Number of true positive hits 68 in 68 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Trm1 methyltransferase
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
68 sequences

TRM1L_BOVIN (A5D7S3), TRM1L_HUMAN (Q7Z2T5), TRM1L_MACFA (Q4R6C7), 
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PDB
[Detailed view]
6 PDB

2DUL; 2EJT; 2EJU; 2YTZ; 3AXS; 3AXT