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PROSITE entry PS51608


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51608
Entry name [info] SAM_MT_UBIE
Accession [info] PS51608
Entry type [info] MATRIX
Date [info] 01-NOV-2011 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51555
Associated ProRule [info] PRU00940

Name and characterization of the entry

Description [info] UbiE family SAM-binding methyltransferase profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=230;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=225;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.8479705; R2=0.0229999; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=13732.1855469; R2=14.5824633; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=964; H_SCORE=27790; N_SCORE=25.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=159; H_SCORE=16051; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-11; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 411 in 411 different sequences
Number of true positive hits 411 in 411 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
411 sequences

COQ5_ARATH  (Q9LVC8), COQ5_BOVIN  (Q0P5A2), COQ5_CAEEL  (P34666), 
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PDB
[Detailed view]
2 PDB

4OBW; 4OBX