PROSITE logo

PROSITE entry PS51562


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51562
Entry name [info] RNA_CAP0_MT
Accession [info] PS51562
Entry type [info] MATRIX
Date [info] 01-NOV-2011 CREATED;
22-FEB-2023 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51562
Associated ProRule [info] PRU00895

Name and characterization of the entry

Description [info] mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=286;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=281;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2489257; R2=0.0087920; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=1792; N_SCORE=18.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=484; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-37; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 55 in 55 different sequences
Number of true positive hits 55 in 55 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] mRNA cap 0 methyltransferase
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
55 sequences

MCEL_CAMPM  (Q8V2R8), MCEL_CAMPS  (Q775U0), MCEL_CWPXB  (Q8QMV9), 
» more

PDB
[Detailed view]
26 PDB

1RI1; 1RI2; 1RI3; 1RI4; 1RI5; 1Z3C; 2HV9; 2VDW; 3BGV; 3EPP; 4CKB; 4CKC;
» more