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PROSITE entry PS51550


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51550
Entry name [info] EPH_LBD
Accession [info] PS51550
Entry type [info] MATRIX
Date [info] 01-OCT-2011 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51550
Associated ProRule [info] PRU00883

Name and characterization of the entry

Description [info] Eph receptor ligand-binding domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=182;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=177;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4008522; R2=0.0164643; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=12645.8867188; R2=10.8473721; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=523; H_SCORE=18319; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=249; H_SCORE=15347; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Eph LBD
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
54 sequences

EPA4A_XENLA (Q91845), EPA4B_XENLA (Q91694), EPB1A_XENLA (Q91571), 
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PDB
[Detailed view]
53 PDB

1KGY; 1NUK; 1SHW; 2BBA; 2HLE; 2LW8; 2QBX; 2WO1; 2WO2; 2WO3; 2X10; 2X11;
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