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PROSITE entry PS51545


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PURL: https://purl.expasy.org/prosite/signature/PS51545

Direct ScanProsite submission
General information about the entry

Entry name [info] PIK_HELICAL
Accession [info] PS51545
Entry type [info] MATRIX
Date [info] 01-AUG-2011 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51545
Associated ProRule [info] PRU00878

Name and characterization of the entry

Description [info] PIK helical domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=177;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=172;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.9079437; R2=0.0117903; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=11265.0527344; R2=9.7352219; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=475; H_SCORE=15889; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=305; H_SCORE=14234; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 68 in 68 different sequences
Number of true positive hits 68 in 68 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] PIK helical
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
68 sequences

AGE1_CAEBR  (P0C5E7), AGE1_CAEEL  (Q94125), P3C2A_HUMAN (O00443), 
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PDB
[Detailed view]
335 PDB

1E7U; 1E7V; 1E8W; 1E8X; 1E8Y; 1E8Z; 1E90; 1HE8; 2A4Z; 2A5U; 2CHW; 2CHX;
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