PROSITE entry PS51536
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PURL: https://purl.expasy.org/prosite/signature/PS51536
Direct ScanProsite submission
General information about the entry
| Entry name [info] | TFG |
| Accession [info] | PS51536 |
| Entry type [info] | MATRIX |
| Date [info] |
01-MAY-2010 CREATED;
10-MAY-2017 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51512 |
| Associated ProRule [info] | PRU00869 |
Name and characterization of the entry
| Description [info] | TFG box profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=21; /DISJOINT: DEFINITION=PROTECT; N1=3; N2=19; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3437343; R2=0.0096206; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=1793.7653809; R2=0.3868313; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=900; H_SCORE=2142; N_SCORE=11.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=433; H_SCORE=1961; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-103; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ...» more |
Numerical results [info]
| Total number of hits | 18 in 18 different sequences |
| Number of true positive hits | 18 in 18 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | MOTIF |
| Feature description [info] | TFG box |
| Version [info] | 4 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
18 sequences
DCP5L_ARATH (Q9FH77), DCP5_ARATH (Q9C658), L14AA_XENLA (A0A8M2),» more
|
| PDB [Detailed view] |
1 PDB
6F9S |