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PROSITE entry PS51532


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PURL: https://purl.expasy.org/prosite/signature/PS51532

Direct ScanProsite submission
General information about the entry

Entry name [info] PITH
Accession [info] PS51532
Entry type [info] MATRIX
Date [info] 01-MAR-2011 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51532
Associated ProRule [info] PRU00864

Name and characterization of the entry

Description [info] PITH domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=176;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=171;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0399852; R2=0.0075324; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=20327.8691406; R2=11.7125607; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=991; H_SCORE=31935; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=593; H_SCORE=27273; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-26; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 14 in 14 different sequences
Number of true positive hits 14 in 14 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] PITH
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
14 sequences

PITH1_ARATH (Q9SQZ9), PITH1_CAEEL (Q95ZI6), PITH1_DANRE (Q6NYX8), 
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PDB
[Detailed view]
10 PDB

1WWY; 1XOY; 9E8G; 9E8H; 9E8I; 9E8J; 9E8K; 9E8L; 9E8N; 9E8O