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PROSITE entry PS51483


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PURL: https://purl.expasy.org/prosite/signature/PS51483

Direct ScanProsite submission
General information about the entry

Entry name [info] B5
Accession [info] PS51483
Entry type [info] MATRIX
Date [info] 01-MAR-2010 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51483
Associated ProRule [info] PRU00816

Name and characterization of the entry

Description [info] B5 domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=77;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=72;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2625856; R2=0.0069190; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=10706.2128906; R2=2.8104887; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=1263; H_SCORE=14256; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=613; H_SCORE=12429; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-31; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 346 in 346 different sequences
Number of true positive hits 346 in 346 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] B5
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
346 sequences

SYFB_ACIAD  (Q6F873), SYFB_AERPE  (Q9Y9I3), SYFB_AGRFC  (Q8UIN4), 
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PDB
[Detailed view]
35 PDB

1B70; 1B7Y; 1EIY; 1JJC; 1PYS; 2AKW; 2ALY; 2AMC; 2CXI; 2IY5; 2RHQ; 2RHS;
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