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PROSITE entry PS51482


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51482
Entry name [info] DEGV
Accession [info] PS51482
Entry type [info] MATRIX
Date [info] 01-FEB-2010 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51482
Associated ProRule [info] PRU00815

Name and characterization of the entry

Description [info] DegV domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=277;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=272;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.1149597; R2=0.0054798; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=1439; N_SCORE=9.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=983; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-25; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 80 in 80 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] DegV
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
80 sequences

DEGV1_STRGN (Q4L2X1), DEGV_BACSU  (P32436), Y026_CLOPE  (Q8XPD7), 
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PDB
[Detailed view]
18 PDB

1MGP; 1VPV; 2G7Z; 3EGL; 3FYS; 4X9X; 5UTO; 5WOO; 6ALW; 6CNG; 6DKE; 6MH9;
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