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PROSITE entry PS51468


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51468
Entry name [info] VIT
Accession [info] PS51468
Entry type [info] MATRIX
Date [info] 01-OCT-2009 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51468
Associated ProRule [info] PRU00801

Name and characterization of the entry

Description [info] VIT domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=129;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=124;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1037693; R2=0.0080717; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=21928.7304688; R2=8.0408640; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=979; H_SCORE=29801; N_SCORE=10.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=545; H_SCORE=26311; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-24; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 41 in 41 different sequences
Number of true positive hits 41 in 41 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] VIT
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

ITIH1_BOVIN (Q0VCM5), ITIH1_HUMAN (P19827), ITIH1_MESAU (P97278), 
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PDB
[Detailed view]
4 PDB

6FPY; 6FPZ; 9C4F; 9C4N