PROSITE logo

PROSITE entry PS51459


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51459
Entry name [info] FIDO
Accession [info] PS51459
Entry type [info] MATRIX
Date [info] 01-JUL-2009 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51459
Associated ProRule [info] PRU00791

Name and characterization of the entry

Description [info] Fido domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=138;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=133;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0208886; R2=0.0137402; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=8310.4492188; R2=3.6167665; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=487; H_SCORE=10072; N_SCORE=8.7; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=326; H_SCORE=9490; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-6; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 42 in 41 different sequences
Number of true positive hits 42 in 41 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Bacteriophages, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Fido
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

ANKX_LEGPH  (Q5ZXN6), BEPA_BARHE  (Q6G2A9), DOC_BPP1(Q06259), 
» more

PDB
[Detailed view]
49 PDB

2G03; 2JK8; 2VY3; 2VZA; 3DD7; 3DD9; 3EQX; 3K33; 3KH2; 3LET; 3N3U; 3S6A;
» more