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PROSITE entry PS51459


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PURL: https://purl.expasy.org/prosite/signature/PS51459

Direct ScanProsite submission
General information about the entry

Entry name [info] FIDO
Accession [info] PS51459
Entry type [info] MATRIX
Date [info] 01-JUL-2009 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51459
Associated ProRule [info] PRU00791

Name and characterization of the entry

Description [info] Fido domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=138;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=133;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.0208886; R2=0.0137402; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=8310.4492188; R2=3.6167665; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=487; H_SCORE=10072; N_SCORE=8.7; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=326; H_SCORE=9490; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-6; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 42 in 41 different sequences
Number of true positive hits 42 in 41 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Bacteriophages, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Fido
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
41 sequences

ANKX_LEGPH  (Q5ZXN6), BEPA_BARHE  (Q6G2A9), DOC_BPP1(Q06259), 
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PDB
[Detailed view]
49 PDB

2G03; 2JK8; 2VY3; 2VZA; 3DD7; 3DD9; 3EQX; 3K33; 3KH2; 3LET; 3N3U; 3S6A;
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