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PROSITE entry PS51422


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51422
Entry name [info] SAR1
Accession [info] PS51422
Entry type [info] MATRIX
Date [info] 01-DEC-2008 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51417
Associated ProRule [info] PRU00756

Name and characterization of the entry

Description [info] small GTPase SAR1 family profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=179;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=174;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-2.7613292; R2=0.0039843; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=-12354.1425781; R2=27.9933796; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=2827; H_SCORE=66783; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=2325; H_SCORE=52730; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-18; D=-40; I=-40; I0=-18; B1=*; E1=*; MI=-210; MD=-210; IM=-210; DM=-210;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51417; PS51418; PS51419; PS51420; PS51421; PS51423; PS51424

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 50 in 50 different sequences
Number of true positive hits 50 in 50 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.04 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo, L_Cerutti
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
50 sequences

SAR1A_ARATH (O04834), SAR1A_BOVIN (Q3T0D7), SAR1A_BRACM (O04266), 
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UniProtKB/Swiss-Prot
False negative sequences
1 sequence

SAR1_ENCCU  (Q8SS09)

		
PDB
[Detailed view]
21 PDB

1F6B; 1M2O; 2FA9; 2FMX; 2GAO; 2QTV; 4BZI; 6GNI; 6VS4; 6X90; 6ZGA; 8BSH;
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