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PROSITE entry PS51418


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51418
Entry name [info] RAN
Accession [info] PS51418
Entry type [info] MATRIX
Date [info] 01-DEC-2008 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51417
Associated ProRule [info] PRU00752

Name and characterization of the entry

Description [info] small GTPase Ran family profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=165;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=160;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-6.1701593; R2=0.0037684; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=-3205.4382324; R2=12.5203867; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=3920; H_SCORE=45874; N_SCORE=8.6; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=3363; H_SCORE=38901; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-19; D=-40; I=-40; I0=-19; B1=*; E1=*; MI=-210; MD=-210; IM=-210; DM=-210;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51417; PS51419; PS51420; PS51421; PS51422; PS51423; PS51424

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 50 in 50 different sequences
Number of true positive hits 50 in 50 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.04 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo, L_Cerutti
Version [info] 7

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
50 sequences

GSP1_CANAW  (Q9P4E9), GSP1_CANGA  (Q6FR65), GSP1_EREGS  (Q74ZA9), 
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UniProtKB/Swiss-Prot
False negative sequences
1 sequence

GSP1_ENCCU  (Q8SS11)

		
PDB
[Detailed view]
150 PDB

1BYU; 1I2M; 1IBR; 1K5D; 1K5G; 1QBK; 1QG2; 1QG4; 1RRP; 1WA5; 2BKU; 2MMC;
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