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PROSITE entry PS51406


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51406
Entry name [info] FIBRINOGEN_C_2
Accession [info] PS51406
Entry type [info] MATRIX
Date [info] 01-SEP-2008 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00445
Associated ProRule [info] PRU00739

Name and characterization of the entry

Description [info] Fibrinogen C-terminal domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=220;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=220;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.6530205; R2=0.0065278; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=-19872.9628906; R2=23.6214485; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=1524; H_SCORE=16126; N_SCORE=11.6; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=743; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-26; D=-100; I=-100; B1=-350; E1=-350; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 127 in 127 different sequences
Number of true positive hits 127 in 127 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.22 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] PS_Langendijk_Genevaux
Feature key [info] DOMAIN
Feature description [info] fibrinogen C-terminal
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
127 sequences

ANGL1_BOVIN (Q1RMR1), ANGL1_HUMAN (O95841), ANGL1_MOUSE (Q640P2), 
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UniProtKB/Swiss-Prot
False negative sequences
1 sequence

INTLP_ALLMI (P86928)

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

FIBB_RABIT  (P14478)

		
PDB
[Detailed view]
114 PDB

1DEQ; 1EI3; 1FIB; 1FIC; 1FID; 1FZA; 1FZB; 1FZC; 1FZD; 1FZE; 1FZF; 1FZG;
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