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PROSITE entry PS51402


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51402
Entry name [info] CATALASE_3
Accession [info] PS51402
Entry type [info] MATRIX
Date [info] 01-AUG-2008 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00395
Associated ProRule [info] PRU00735

Name and characterization of the entry

Description [info] catalase family profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=480;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=475;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.7017802; R2=0.0059830; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=1304; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=970; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=-400; E1=-400; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 155 in 155 different sequences
Number of true positive hits 155 in 155 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
155 sequences

BCA_STRVP   (P33569), CAT1_NEUCR  (Q9C168), CAT1_PENJA  (P81138), 
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PDB
[Detailed view]
116 PDB

1A4E; 1CF9; 1DGB; 1DGF; 1DGG; 1DGH; 1E93; 1F4J; 1GG9; 1GGE; 1GGF; 1GGH;
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