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PROSITE entry PS51396


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51396
Entry name [info] PUL
Accession [info] PS51396
Entry type [info] MATRIX
Date [info] 01-JUL-2008 CREATED;
13-FEB-2019 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51396
Associated ProRule [info] PRU00729

Name and characterization of the entry

Description [info] PUL domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=272;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=267;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.6412948; R2=0.0101413; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=18709.0273438; R2=20.8475800; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=726; H_SCORE=33844; N_SCORE=9.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=480; H_SCORE=28716; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-5; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 7 in 7 different sequences
Number of true positive hits 7 in 7 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] PUL
Version [info] 6

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
7 sequences

DOA1_YEAST  (P36037), LUB1_SCHPO  (O94289), PLAP_HUMAN  (Q9Y263), 
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PDB
[Detailed view]
5 PDB

3EBB; 3GAE; 3L3F; 3PSP; 3PST