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PROSITE entry PS51385


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51385
Entry name [info] YJEF_N
Accession [info] PS51385
Entry type [info] MATRIX
Date [info] 01-JUN-2008 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51385
Associated ProRule [info] PRU00719

Name and characterization of the entry

Description [info] YjeF N-terminal domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=209;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=204;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2865050; R2=0.0081915; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=881; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=515; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-41; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Post-processing [info]

PROMOTED_BY PS51383

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 138 in 138 different sequences
Number of true positive hits 138 in 138 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] YjeF N-terminal
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
138 sequences

EDC3_CHICK  (Q5ZLS2), EDC3_DANRE  (Q502M5), EDC3_DROME  (Q9VVI2), 
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PDB
[Detailed view]
33 PDB

1JZT; 2AX3; 2DG2; 2O8N; 3D3J; 3D3K; 3K5W; 3RNO; 3RO7; 3ROE; 3ROG; 3ROX;
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