PROSITE logo

PROSITE entry PS51384


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS51384

Direct ScanProsite submission
General information about the entry

Entry name [info] FAD_FR
Accession [info] PS51384
Entry type [info] MATRIX
Date [info] 01-MAY-2008 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51384
Associated ProRule [info] PRU00716

Name and characterization of the entry

Description [info] Ferredoxin reductase-type FAD binding domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=102;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=97;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-1.4206741; R2=0.0059854; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=13245.4394531; R2=4.1187925; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=1658; H_SCORE=20074; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=1324; H_SCORE=18699; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-15; D=-70; I=-70; B1=-400; E1=-400; MI=-205; MD=-205; IM=-205; DM=-205;
...
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 667 in 667 different sequences
Number of true positive hits 667 in 667 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 15
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.80 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] FAD-binding FR-type
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
667 sequences

AIM14_DEBHA (Q6BM09), AIM14_EREGS (Q754F4), AIM33_YEAST (Q04516), 
» more

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

AIM14_CANDC (B9WB34), AIM14_CANTT (C5M5S1), AIM14_CLAL4 (C4Y9R6), 
» more

PDB
[Detailed view]
213 PDB

1A8P; 1AMO; 1B2R; 1BJK; 1BQE; 1BX0; 1BX1; 1CNE; 1CNF; 1CQX; 1DDG; 1DDI;
» more