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PROSITE entry PS51358


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PURL: https://purl.expasy.org/prosite/signature/PS51358

Direct ScanProsite submission
General information about the entry

Entry name [info] NOP
Accession [info] PS51358
Entry type [info] MATRIX
Date [info] 01-JUN-2012 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51358
Associated ProRule [info] PRU00690

Name and characterization of the entry

Description [info] Nop domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=119;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=114;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.6107154; R2=0.0177536; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=6842.3481445; R2=11.6284542; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=445; H_SCORE=12017; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=276; H_SCORE=10052; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-75; I=-75; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] Nop
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
54 sequences

NOP56_BOVIN (Q3SZ63), NOP56_CAEEL (Q21276), NOP56_DICDI (Q54MT2), 
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PDB
[Detailed view]
63 PDB

2OZB; 3JCM; 3JCR; 3SIU; 3SIV; 5GAN; 5GAP; 5NRL; 5O9Z; 5WLC; 5WYJ; 5WYK;
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