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PROSITE entry PS51349


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51349
Entry name [info] FMN_HYDROXY_ACID_DH_2
Accession [info] PS51349
Entry type [info] MATRIX
Date [info] 01-DEC-2007 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00482
Associated ProRule [info] PRU00683

Name and characterization of the entry

Description [info] FMN-dependent alpha-hydroxy acid dehydrogenase domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=383;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=378;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3386879; R2=0.0065414; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=2425; N_SCORE=18.2; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=637; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-19; D=-80; I=-80; B1=-500; E1=-500; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 163 in 163 different sequences
Number of true positive hits 163 in 163 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] window20
Author [info] PS_Langendijk_Genevaux
Feature key [info] DOMAIN
Feature description [info] FMN hydroxy acid dehydrogenase
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
163 sequences

CYB2_TALSN  (B8MKR3), CYB2_WICAO  (P09437), CYB2_YEAST  (P00175), 
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PDB
[Detailed view]
102 PDB

1AL7; 1AL8; 1FCB; 1GOX; 1GYL; 1HUV; 1KBI; 1KBJ; 1LCO; 1LDC; 1LTD; 1P4C;
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