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PROSITE entry PS51305


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51305
Entry name [info] POTA
Accession [info] PS51305
Entry type [info] MATRIX
Date [info] 01-APR-2007 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51237

Name and characterization of the entry

Description [info] Spermidine/putrescine import ATP-binding protein potA family profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=357;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=352;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.9788587; R2=0.0079973; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=1250175; N_SCORE=9999.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=15758; N_SCORE=127.0; MODE=1; TEXT='?';
/CUT_OFF: LEVEL=-2; SCORE=691; N_SCORE=6.5; MODE=1; TEXT='??';
/DEFAULT: M0=-17; D=-60; I=-60; B1=-200; E1=-200; MI=-205; MD=-205; IM=-205; DM=-205;
...
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Post-processing [info]

PROMOTED_BY PS50893

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 158 in 158 different sequences
Number of true positive hits 158 in 158 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] V_Lesaux
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
158 sequences

POTA1_PSEAE (Q9I6T2), POTA2_PSEAE (Q9HY19), POTA_ACET2  (A3DDF6), 
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PDB
[Detailed view]
2 PDB

8Y5F; 8Y5I