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PROSITE entry PS51292


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PURL: https://purl.expasy.org/prosite/signature/PS51292

Direct ScanProsite submission
General information about the entry

Entry name [info] ZF_RING_CH
Accession [info] PS51292
Entry type [info] MATRIX
Date [info] 01-FEB-2007 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51292
Associated ProRule [info] PRU00623

Name and characterization of the entry

Description [info] Zinc finger RING-CH-type profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=62;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=57;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.5666564; R2=0.0068634; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=8548.0878906; R2=2.8060076; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=1302; H_SCORE=12202; N_SCORE=11.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=574; H_SCORE=10159; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-22; D=-120; I=-120; B1=-300; E1=-300; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Post-processing [info]

COMPETES_HIT_WITH PS50089

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 59 in 59 different sequences
Number of true positive hits 59 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.65 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] ZN_FING
Feature description [info] RING-CH-type
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
59 sequences

DOA10_SCHPO (O60103), DOA10_YEAST (P40318), LAP_LSDV(Q91T40), 
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UniProtKB/Swiss-Prot
False negative sequences
4 sequences

FANCL_DROME (Q8T913), ORTH2_ARATH (Q8VYZ0), ORTH4_ARATH (Q9C8E1), 
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PDB
[Detailed view]
7 PDB

1VYX; 2D8S; 2M6M; 3K1L; 8PD0; 8PDA; 8TQM