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PROSITE entry PS51284


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PURL: https://purl.expasy.org/prosite/signature/PS51284

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General information about the entry

Entry name [info] DOC
Accession [info] PS51284
Entry type [info] MATRIX
Date [info] 01-JAN-2007 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51284
Associated ProRule [info] PRU00614

Name and characterization of the entry

Description [info] DOC domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=183;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=178;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.6782188; R2=0.0115543; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=418; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=245; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-20; I=-20; B1=*; E1=*; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 27 in 27 different sequences
Number of true positive hits 27 in 27 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] DOC
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
27 sequences

APC10_ARATH (Q9ZPW2), APC10_BOVIN (Q2YDH1), APC10_CAEEL (H2L2B8), 
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PDB
[Detailed view]
28 PDB

1GQP; 1JHJ; 4UI9; 5A31; 5G04; 5G05; 5KHR; 5KHU; 5L9T; 5L9U; 5LCW; 6Q6G;
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