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PROSITE entry PS51274


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51274
Entry name [info] GATASE_COBBQ
Accession [info] PS51274
Entry type [info] MATRIX
Date [info] 01-DEC-2006 CREATED;
01-OCT-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51274
Associated ProRule [info] PRU00606

Name and characterization of the entry

Description [info] CobBQ-type GATase domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=194;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=189;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2611935; R2=0.0224014; TEXT='NScore';
/CUT_OFF: LEVEL=0; SCORE=324; N_SCORE=9.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=190; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-8; D=-40; I=-40; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51130; PS51273

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 349 in 349 different sequences
Number of true positive hits 349 in 349 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] PS_Langendijk_Genevaux
Feature key [info] DOMAIN
Feature description [info] GATase cobBQ-type
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
349 sequences

CBIA_ARCFU  (O28054), CBIA_CALS4  (Q8RCP4), CBIA_CLOAB  (Q97JB1), 
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PDB
[Detailed view]
5 PDB

5N9M; 6FQB; 6GS2; 6H5E; 7Q8E