PROSITE logo

PROSITE entry PS51217


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51217
Entry name [info] UVRD_HELICASE_CTER
Accession [info] PS51217
Entry type [info] MATRIX
Date [info] 01-JUN-2006 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51198
Associated ProRule [info] PRU00617

Name and characterization of the entry

Description [info] UvrD-like DNA helicase C-terminal domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=266;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=261;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.7698036; R2=0.0030145; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=-6011.2729492; R2=27.8940315; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=2233; H_SCORE=56276; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=1570; H_SCORE=37782; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-13; D=-60; I=-60; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
» more

Post-processing [info]

PROMOTED_BY PS51198

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 255 in 255 different sequences
Number of true positive hits 255 in 255 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.61 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] UvrD-like helicase C-terminal
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
255 sequences

ADDA_ACET2  (A3DH19), ADDA_ALKMQ  (A6TVN2), ADDA_ALKOO  (A8MJ41), 
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

RECB_CHLTR  (O84645)

		
PDB
[Detailed view]
34 PDB

1PJR; 1QHG; 1QHH; 1UAA; 1W36; 2IS1; 2IS2; 2IS4; 2IS6; 2PJR; 3K70; 3LFU;
» more