PROSITE logo

PROSITE entry PS51198


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS51198

Direct ScanProsite submission
General information about the entry

Entry name [info] UVRD_HELICASE_ATP_BIND
Accession [info] PS51198
Entry type [info] MATRIX
Date [info] 01-JUN-2006 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51198
Associated ProRule [info] PRU00560

Name and characterization of the entry

Description [info] UvrD-like DNA helicase ATP-binding domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=290;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=285;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.8038350; R2=0.0041334; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=75402.0000000; R2=0.0000000; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=3193; H_SCORE=75402; N_SCORE=15.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=1137; H_SCORE=75402; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-16; D=-50; I=-50; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
» more

Post-processing [info]

PROMOTED_BY PS51217

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 261 in 261 different sequences
Number of true positive hits 261 in 261 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] N_Hulo
Feature key [info] DOMAIN
Feature description [info] UvrD-like helicase ATP-binding
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
261 sequences

ADDA_ACET2  (A3DH19), ADDA_ALKMQ  (A6TVN2), ADDA_ALKOO  (A8MJ41), 
» more

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

FBH1_CHICK  (F1ND48), FBH1_HUMAN  (Q8NFZ0), FBH1_MOUSE  (Q8K2I9), 
» more

PDB
[Detailed view]
47 PDB

1PJR; 1QHG; 1QHH; 1UAA; 1W36; 2IS1; 2IS2; 2IS4; 2IS6; 2PJR; 3K70; 3LFU;
» more